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Exposing Your Genome Through Harvard's Personal Genome Project

Pgp

A project at Harvard, the Personal Genome Project, is publishing the complete genomes of 10 volunteers including Harvard psychology professor Steven Pinker.  The project is experimenting with the consequences of revealing one's genome.

Blockquote The goal of the project, which hopes to expand to 100,000 participants, is to speed medical research by dispensing with the elaborate precautions traditionally taken to protect the privacy of human subjects. The more genetic information can be made open and publicly available, nearly everyone agrees, the faster research will progress.

In exchange for the decoding of their DNA, participants agree to make it available to all — along with photographs, their disease histories, allergies, medications, ethnic backgrounds and a trove of other traits, called phenotypes, from food preferences to television viewing habits.

Including phenotypes, which most other public genetic databases have avoided in deference to privacy concerns, should allow researchers to more easily discover how genes and traits are linked. Because the “PGP 10,” as they call themselves, agreed to forfeit their privacy, any researcher will have a chance to mine the data, rather than just a small group with clearance.

The project is as much a social experiment as a scientific one. “We don’t yet know the consequences of having one’s genome out in the open,” said George M. Church, a human geneticist at Harvard who is the project’s leader and one of its subjects. “But it’s worth exploring.”

A new federal law prohibits health insurers and employers from discriminating against individuals on the basis of their genetic profile. But any one of the PGP 10 could be denied life insurance, long-term care insurance or disability insurance, with no legal penalty. And no law can bar colleagues from raising an annoyed eyebrow at a PGP participant who, say, indulges in a brownie after disclosing on the Internet that she is genetically predisposed to diabetes.

MIT Professor's Brain Injury and Recovery

 Seymour Seymour Papert, a distinguished retired MIT professor who suffered a severe brain injury in an accident on a Vietnamese street, is struggling to recover his former abilities.

"Papert, who was a professor of mathematics, education, and media technology at MIT, has devoted much of his career to learning: self-learning (he taught himself Russian) and learning about learning. He was one of the early pioneers of artificial intelligence, and he invented the computer language Logo to teach children about computers.

Now he must learn something even more challenging - how to be Seymour Papert again.

Nineteen months ago he was struck by a motorbike in Hanoi and suffered a brain injury so severe he was comatose for a month and couldn't walk, talk, or read. The man widely considered to be the most important living thinker about the way children learn is struggling with an unreliable memory and an uncertain grip on words. And his wife and his caregivers are using insights from his theories about learning to help bring him back to a normal life."

A very well-done article that covers a lot of issues surrounding this sad story.

More Multiples in Mass.

Hepburn_and_the_quints
Moms in Massachusetts are more likely to have more than one baby:

"Women who give birth in Massachusetts are more likely to be older -- and more likely to have multiple births -- and to be using techniques to assist conception which also increases multiples." (Image:  Dionne quintuplets).

Small Victory: Boston Least Obese in Survey

Small Victory:  In a Forbes survey of the 50 most populated cities in the U.S., Boston had the fewest obese residents with only 19% obese.

New England States Pretty Healthy, Vermont Number 1 in New Research

New England states pretty healthy according to new research.  The New England states rankings:  Vermont (1); New Hampshire (4); Connecticut (5); Maine (7); Massachusetts (9).

The Onion on Maine's Decision to Give Contraception to Middle Schoolers

Thumb The Onion on Portland,  Maine's decision to give contraception to middle schoolers:      "This is outrageous. I think my daughter should have to get pregnant at 13 just like I did."

UMass Prof's Fight for Marijuana

Psisinsidelogopix Lyle Craker, a professor in UMass' deparment of Plant, Soil & Insect Sciences, may be facing victory in his long fight to grow medicinal marijuana for scientific research following the decision by a judge "that it would be in the public interest for Dr Craker to grow the drug. Mary Ellen Bittner said that the government's monopoly on the legal growing of cannabis is hindering legitimate research and that there is a need for a second licensed facility to grow and supply it to authorised researchers."

Boston's University Students Turned Into Test Subjects

Flexible scheduling and the prospect of relatively easy money outside of a regular job combined with the huge number of scientific and medical research institutions in Boston and Cambridge are turning the captive population of students into professional test subjects.  They get paid of course but not necessarily all that much.   One grad student said, " "It's amazing what they'll do for 10 bucks.  I almost feel bad for them."

More profitably Craigslist has this posting from the Brigham for young people looking to trade 3 weeks of their life for $4,375:  "We are looking for healthy 18-30 year-old men and women, on no medications (some birth control okay) for a sleep and genetic research study. Spend 21 days at the Brigham & Women’s Hospital and receive up to $4,375."

The article notes the proliferation of ads on the T seeking subjects.  Our favorites are the ones inviting people with disturbing psychological symptoms to call a receptionist:  "Have a violent temper; difficulty concentrating; frequent trouble with the police?  Call Ellen today to see if you're eligible for our study on sociopathy." 

Lisa Cunningham and Directed Organ Donation

Lisa Cunningham of Ashland died recently while waiting for a kidney transplant.  Earlier, Virginia Postrel related how Cunningham's attempt to attract publicity for her plight.  She talked to a newspaper reporter hoping to attract a donor: a stranger who might be moved by the story but Beth Israel Deaconess Medical Center refused to perform any donation that resulted from the article.  The reason for their refusal:  "Some hospitals refuse to do transplant surgery if a stranger wants to designate a particular recipient" citing an unfairness in that some may have a more compelling story.  Yet as Postrel points out, hospitals don't refuse to perform surgery when the voluntary donor is a relative or friend which "simply rewards people for having close (and healthy) friends and family members. It lets people who don't have the right connections suffer and die."  And given that there are "66,000 Americans on the waiting list for kidney donations" it is hard to see how the current system's failures are not more significantly unfair.  Cunningham was 40 and is survived by her 10-year-old son.

Martha's Vineyard: Rabbit Fever Zone

Martha's Vineyard, is the world headquarters for summer island fun and rabbit fever (which sounds kind of cute) but is otherwise known as pneumonic tularemia (scarier), a "highly infectious and potentially fatal bacterial disease."  Working outside is the best way to get it but you can even get it mowing the lawn.  The disease is caused by a bacteria carried by rabbits and rodents.  Symptoms include "sudden fever; chills; headaches; diarrhea; muscle aches; joint pain; dry cough; progressive weakness." Have fun this weekend and watch out for the rabbits!

Vermont Leads the Nation: In Nuclear Waste per Resident

Vermont's small population and the presence of the Vermont Yankee nuclear power plant means that it has achieved an unwelcome statistical distinction.  Although the total nuclear waste in Vermont is projected to be 1.3 million pounds that adds up to 2.15 pounds per person, enough to lead the country.   (Heavily populated Massachusetts has 0.23 pounds per person.)

More Suicides Than Homicides in Massachusetts

It's hard to classify this news but the Department of Public Health reports that more people commit suicide in Massachusetts than are murdered with suicide "among the leading causes of death in individuals 15–44 years old." 

The DPH also points outs some grim facts, noting that "Suicide rates were the highest among white non-Hispanics, compared with Black, Asian and Hispanic groups. However, hospitalization rates for self-inflicted injuries were the highest among Hispanics" and that "overall, the leading method of suicide in Massachusetts in 2003 was hanging or suffocation. Poisoning is the leading method among females. Nationally, the use of firearms is the leading method."

Tips About EEE

EeecycleFollowing several cases of Eastern Equine Encephalitis (EEE) in Massachusetts, this article answers questions and offers suggestions about the illness.

Emus have also been affected0600emu_1

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